PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5LSP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H1	13	H1-13-1	15	KVSGYTFTDYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H2	10	H2-10-1	8	LVDPEDGETI	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H3	13	H3-13-*	-1	ATDATTPYWGMMW	BBBBABABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	14	ADTSTDTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	9	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	11	YDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	57.1	L3	9	L3-9-cis7-1	7	QQGDsFPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GSGTEF	EBEABB
S	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H1	13	H1-13-1	16	KVSGYTFTDYYMH	BBBLBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H2	10	H2-10-1	8	LVDPEDGETI	BBBAAALBBB
S	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H3	13	H3-13-*	-1	ATDATTPYWGMMW	BBBBABABBBBAB
S	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	94.5	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	14	ADTSTDTA	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	9	QASQDISNYLN	BBABBAEABBB
T	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	11	YDASNLET	BLLABBBB
T	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	57.1	L3	9	L3-9-cis7-1	8	QQGDsFPLT	BBAABBbBB
T	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.0	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022