PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5LMJ

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	21	TASGRTFSDYDMA	BBBLEBAAABBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-2	8	AISTKGGSTW	BBBAALABBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAGAvtYYSARYEYDY
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRTFSDYDMA	BBBEBLAAABBBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-2	8	AISTKGGSTW	BBBAALABBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAGAvtYYSARYEYDY
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	TASGRTFSDYDMA	BBBEBEAAABBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-2	9	AISTKGGSTW	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAGAvtYYSARYEYDY
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	19	TASGRTFSDYDMA	BBBLEBAAABBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	AISTKGGSTW	BBBAALABBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAGAvtYYSARYEYDY
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	93.2	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022