PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5LJY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*01	100.0	Hu_IGHV4-OR15-8*01	100.0	H1	14	H1-14-*	-1	VVSGGSISsSNWWS	BBBLEBAAABABBB
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*01	100.0	Hu_IGHV4-OR15-8*01	100.0	H2	9	H2-9-*	-1	EIYHSGSPN	BBABAABBB
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*01	100.0	Hu_IGHV4-OR15-8*01	100.0	H3	6	H3-6-2	10	ARQMRQ	BBLLAB
H	heavy	Homo.sapiens	Hu_IGHV4-OR15-8*01	100.0	Hu_IGHV4-OR15-8*01	100.0	H4	8	H4-8-1	21	VDKSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	15	QGDSLRSYYAS	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L3	11	L3-11-2	14	NSRDSSGNHNV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	12	SSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022