PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5L0Q

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	81.8	L1	11	L1-11-1	13	RASQNIGTNIH	BBABBAEABBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	100.0	L2	8	L2-8-*	-1	KYASESIS	BLaABBBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-1	10	QQSNRWPFT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	84.6	H1	13	H1-13-1	10	KASGYTFTNYWLQ	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	70.0	H2	10	H2-10-1	10	AIYPRDGDAK	BBBAAALBBB
C	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	50.0	H3	13	H3-13-*	-1	ARANYGLYYAMDR	BBBBLBaBBBBAB
C	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	62.5	H4	8	H4-8-1	9	VNESSSTA	BBAAALBB
E	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	81.8	L1	11	L1-11-1	13	RASQNIGTNIH	BBABBAEABBB
E	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	100.0	L2	8	L2-8-*	-1	KYASESIS	BLaABBBB
E	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-1	11	QQSNRWPFT	BBAABBbBB
E	kappa	Homo.sapiens	Mo_IGKV5-48*01	89.9	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	84.6	H1	13	H1-13-1	10	KASGYTFTNYWLQ	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	70.0	H2	10	H2-10-1	9	AIYPRDGDAK	BBBAAALBBB
F	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	50.0	H3	13	H3-13-*	-1	ARANYGLYYAMDR	BBBBLBaBBBBAB
F	heavy	Homo.sapiens	Mo_IGHV1-87*01	79.5	Mo_IGHV1-87*01	62.5	H4	8	H4-8-1	10	VNESSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022