PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KZP

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	76.9	H1	13	H1-13-1	10	TASGFTFNNYGMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VIWFDENNKY	BBBABAABBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDISLVrdAFIYFDF
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	76.9	H1	13	H1-13-1	8	TASGFTFNNYGMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VIWFDENNKY	BBBABAABBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDISLVrdAFIYFDF
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	76.9	H1	13	H1-13-1	8	TASGFTFNNYGMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VIWFDENNKY	BBBABAABBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDISLVrdAFIYFDF
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	76.9	H1	13	H1-13-1	8	TASGFTFNNYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VIWFDENNKY	BBBABAABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDISLVrdAFIYFDF
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	7	RASQSVSSYLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	4	YDASNRAT	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	85.7	L3	8	L3-8-1	8	QQRSNWIT	BBAABEBB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
J	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	8	RASQSVSSYLA	BBABBAEABBB
J	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	4	YDASNRAT	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	85.7	L3	8	L3-8-1	8	QQRSNWIT	BBAABEBB
J	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBAABAEABBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	4	YDASNRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	85.7	L3	8	L3-8-1	9	QQRSNWIT	BBAABEBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	5	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	5	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	85.7	L3	8	L3-8-1	8	QQRSNWIT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

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