PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KVL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	93.2	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	8	TVSGYSITsSYSWN	BBBLBBAAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	93.2	Mo_IGHV3-1*02	77.8	H2	9	H2-9-1	7	NIYYSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	93.2	Hu_IGHV4-61*08	50.0	H3	5	H3-5-*	-1	ANPRV	BBAAB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	93.2	Hu_IGHV4-61*08	87.5	H4	8	H4-8-1	7	RDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Mo_IGKV9-124*01	90.9	L1	11	L1-11-1	5	RASQEISGYLG	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Mo_IGKV9-124*01	100.0	L2	8	L2-8-1	6	YAASTLDS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	9	LQYASFPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	10	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022