PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KVG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-81*01	88.7	Mo_IGHV1-81*01	100.0	H1	13	H1-13-1	9	KASGYTFTSYGIS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	88.7	Mo_IGHV1-81*01	90.0	H2	10	H2-10-1	7	VIYPRSGNTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	88.7	Mo_IGHV1-81*01	100.0	H3	9	H3-9-*	-1	ARENYGSVY	BBBALLBAB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	88.7	Mo_IGHV1-81*01	87.5	H4	8	H4-8-1	6	ADKSSSSA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	100.0	Mo_IGKV6-13*01	100.0	L1	11	L1-11-1	5	KASQNVGTAVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	100.0	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	100.0	Mo_IGKV6-13*01	85.7	L3	9	L3-9-cis7-1	20	QQFSSYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	100.0	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022