PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KVF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-64*01	97.3	Mo_IGHV1-64*01	92.3	H1	13	H1-13-1	9	KASGYTFTSSWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-64*01	97.3	Mo_IGHV1-64*01	100.0	H2	10	H2-10-1	6	MIHPNSGSTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-64*01	97.3	Mo_IGHV1-64*01	100.0	H3	12	H3-12-*	-1	ARYYYDYDGMDY	BBBBBBAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-64*01	97.3	Mo_IGHV1-64*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-1	6	KSSQSLlyssnqKNYLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	7	QQYYTYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022