PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KN5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-75*01	92.3	H1	13	H1-13-1	13	KASGYTFTDAYIN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-75*01	60.0	H2	10	H2-10-*	-1	WIWPGPVITY	BBBAABEBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	11	H3-11-*	-1	ARREVLSPFAY	BBBBBLBBBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	12	ADKSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	9	RSSQSIvhstgNTYLE	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	14.3	L3	9	L3-9-cis7-1	11	FHGTHVPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	32	GSGTDF	BBLABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-75*01	92.3	H1	13	H1-13-1	16	KASGYTFTDAYIN	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-75*01	60.0	H2	10	H2-10-*	-1	WIWPGPVITY	BBBABALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	11	H3-11-*	-1	ARREVLSPFAY	BBBBLLBBBAB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	6	ADKSTSTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	12	RSSQSIvhstgNTYLE	BBABBABBAALBBBBB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	9	YKVSNRFS	BLEABBBB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	14.3	L3	9	L3-9-cis7-1	12	FHGTHVPYT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	22	GSGTDF	EBLABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022