PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5KAN

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	69.2	H1	13	H1-13-4	14	KTSGYTFTRFGMS	BBBLBBABLBBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	60.0	H2	10	H2-10-1	12	WISGYTGDTK	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	0.0	H3	21	H3-21-*	-1	VRNRVQmevspatQSTWYMDL
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	87.5	H4	8	H4-8-*	-1	TDTSTGTA	BBABbBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	69.2	H1	13	H1-13-*	-1	KTSGYTFTRFGMS	BBAABBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	60.0	H2	10	H2-10-1	12	WISGYTGDTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	0.0	H3	21	H3-21-*	-1	VRNRVQmevspatQSTWYMDL
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	87.5	H4	8	H4-8-*	-1	TDTSTGTA	BBAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	69.2	H1	13	H1-13-4	14	KTSGYTFTRFGMS	BBBLBBABLBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	60.0	H2	10	H2-10-1	12	WISGYTGDTK	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	0.0	H3	21	H3-21-*	-1	VRNRVQmevspatQSTWYMDL
J	heavy	Homo.sapiens	Hu_IGHV1-18*02	85.5	Hu_IGHV1-18*02	87.5	H4	8	H4-8-*	-1	TDTSTGTA	BBABbBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022