PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5K9O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	84.6	H1	13	H1-13-*	-1	KASGYSFSSYGIS	BAEBaBBBABLBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	100.0	H2	10	H2-10-*	-1	WISAYNGNTN	BBBAAbBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	0.0	H3	15	H3-15-*	-1	ARDRPHiLTGFDFDY
A	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	100.0	H4	8	H4-8-1	15	TDTSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	87.5	L1	16	L1-16-*	-1	RSSQGLvyidgNTYLN	BBABBBAEBLLAEBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	62.5	L2	8	L2-8-1	20	YNVFTRDS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	100.0	L3	9	L3-9-*	-1	MQGTHWPYT	BBBEBABAE
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	84.6	H1	13	H1-13-*	-1	KASGYSFSSYGIS	BBBLBlBALBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	100.0	H2	10	H2-10-*	-1	WISAYNGNTN	BBBAABABBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	0.0	H3	15	H3-15-*	-1	ARDRPHiLTGFDFDY
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	100.0	Hu_IGHV1-18*02	100.0	H4	8	H4-8-1	15	TDTSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	87.5	L1	16	L1-16-*	-1	RSSQGLvyidgNTYLN	BBABBBALEBBAEBAE
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	62.5	L2	8	L2-8-1	21	YNVFTRDS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	100.0	L3	9	L3-9-*	-1	MQGTHWPYT	BBBEBABAL
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	95.7	Hu_IGKV2-30*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEBEa

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022