PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5K59

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	86.7	H1	15	H1-15-*	-1	TVSGGSISsgSYYWD	BBBLEBAAABABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	77.8	H2	9	H2-9-1	12	NIYKSGSTY	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H3	11	H3-11-*	-1	ARERGMHYMDV	BBBBBLABBAB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	21	VDTSKNQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	90.9	L1	11	L1-11-2	7	RASQSINSYLN	BBABBALLBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	7	YAASSLQS	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	13	QQQFDPPFT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	86.7	H1	15	H1-15-1	18	TVSGGSISsgSYYWD	BBBLEBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	77.8	H2	9	H2-9-1	12	NIYKSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H3	11	H3-11-*	-1	ARERGMHYMDV	BBBBBLABBAB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	100.0	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	20	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	90.9	L1	11	L1-11-2	6	RASQSINSYLN	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	7	YAASSLQS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	13	QQQFDPPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022