PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5JZ7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	84.6	H1	13	H1-13-*	-1	KASGGTFSTYGIS	BBBEBLAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	11	GIIPIFDTGN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	21	H3-21-*	-1	ARSSRIydlnpslTAYYDMDV
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	17	SGSSSNIGNNYVS	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	18	YDNNKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	9	GTWDSSLSAWV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	84.6	H1	13	H1-13-*	-1	KASGGTFSTYGIS	BBBEBLAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	11	GIIPIFDTGN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	21	H3-21-*	-1	ARSSRIydlnpslTAYYDMDV
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	84.6	H1	13	H1-13-*	-1	KASGGTFSTYGIS	BBBEBLAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	11	GIIPIFDTGN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	21	H3-21-*	-1	ARSSRIydlnpslTAYYDMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	18	SGSSSNIGNNYVS	BBBAABAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	18	YDNNKRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	8	GTWDSSLSAWV	BBBBAAALBBB
I	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	84.6	H1	13	H1-13-*	-1	KASGGTFSTYGIS	BBBEBLAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	11	GIIPIFDTGN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	21	H3-21-*	-1	ARSSRIydlnpslTAYYDMDV
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	8	ADESTSTA	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	17	SGSSSNIGNNYVS	BBBAABAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	18	YDNNKRPS	BLEABBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	9	GTWDSSLSAWV	BBBBAAALBBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	18	SGSSSNIGNNYVS	BBBAABAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	18	YDNNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L3	11	L3-11-1	10	GTWDSSLSAWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022