PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5JRP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H1	15	H1-15-2	9	TVSGGSIssSSYYWG	BBBLEBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	55.6	H2	9	H2-9-1	8	SVYYSGGAS	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	50.0	H3	17	H3-17-*	-1	ASIYgsgTFYYYFYMDV
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	9	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	90.9	L1	11	L1-11-*	-1	QASQVISNYLN	BBABBBABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	4	YDTSNLKT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	71.4	L3	9	L3-9-1	12	QQYENlQFT	BBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022