PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5JNY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	13	SASGFDFDNAWMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	9	RITGpgEGWSVD	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyppgEEYFQD
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	50.0	H4	8	H4-8-1	7	RLNSINFL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	7	RGDSLRSHYAS	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	9	ASGNRA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	13	SASGFDFDNAWMT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	9	RITGpgEGWSVD	BBBBAAALLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyppgEEYFQD
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	50.0	H4	8	H4-8-1	7	RLNSINFL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	8	RGDSLRSHYAS	BBAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	9	ASGNRA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022