PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5JMO

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	84.6	H1	13	H1-13-1	8	AASGFTFSSYSMY	BBBLBBAAABBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	60.0	H2	10	H2-10-2	10	SINRVGSNTD	BBBAALABBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	0.0	H3	10	H3-10-*	-1	AVGMYAAPPW	BABAABBBaA
C	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	84.6	H1	13	H1-13-1	7	AASGFTFSSYSMY	BBBLBBAAABBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	60.0	H2	10	H2-10-2	11	SINRVGSNTD	BBBAALABBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	0.0	H3	10	H3-10-*	-1	AVGMYAAPPW	BABAABBBaA
D	heavy	Camelus.dromedarius	Ca_IGHV1S20*01	94.5	Ca_IGHV1S20*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022