PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5JHL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	84.6	H1	13	H1-13-*	-1	KTSENTFTEYTMH	BBEABBBABBBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	80.0	H2	10	H2-10-1	27	GIDPNNGGTN	BBBAAALBBL
H	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	0.0	H3	10	H3-10-*	-1	GRRDYYALDY	BBBAABBBAB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	96.7	Mo_IGHV1S113*01	87.5	H4	8	H4-8-1	16	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	81.8	L1	11	L1-11-1	9	KASQHVGSAVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	87.5	L2	8	L2-8-1	15	HSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	85.7	L3	8	L3-8-3	12	QQYNSYPT	BBAABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	97.1	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022