PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IWL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Mo_IGHV1-12*01	92.3	H1	13	H1-13-1	13	KASGYTFTNYNMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Mo_IGHV1-12*01	80.0	H2	10	H2-10-1	14	TIYPGNDDTS	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Hu_IGHV1-3*04	100.0	H3	10	H3-10-*	-1	ARGGYRAMDY	BBEBAABBAB
A	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Hu_IGHV1-3*04	87.5	H4	8	H4-8-1	6	ADTSASTA	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	8	RSSQSIvysngNTYLG	BBABBABBAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	BLEABBBA
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	9	FQGSHVPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	9	RSSQSIvysngNTYLG	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	BLEABBBA
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	10	FQGSHVPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Mo_IGHV1-12*01	92.3	H1	13	H1-13-1	13	KASGYTFTNYNMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Mo_IGHV1-12*01	80.0	H2	10	H2-10-1	13	TIYPGNDDTS	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Hu_IGHV1-3*04	100.0	H3	10	H3-10-*	-1	ARGGYRAMDY	BBEBAABBAB
B	heavy	Homo.sapiens	Hu_IGHV1-3*04	94.5	Hu_IGHV1-3*04	87.5	H4	8	H4-8-1	9	ADTSASTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022