PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IK3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	92.3	H1	13	H1-13-1	8	AASGFTFSNAWFN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	83.3	H2	12	H2-12-1	10	RIKTNtdGGTTD	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H3	15	H3-15-*	-1	TTGeplvnHITILDY
A	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H4	8	H4-8-1	5	RDDSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-*	-1	KSSQSVlyssnnKNYLA	BBABBABBAABBBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	10	L3-10-cis78-*	-1	QQYYRTpPLT	BBAABBBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	92.3	H1	13	H1-13-1	8	AASGFTFSNAWFN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	83.3	H2	12	H2-12-1	10	RIKTNtdGGTTD	BBBBAAALLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H3	15	H3-15-*	-1	TTGEPLvNHITILDY
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	100.0	Hu_IGHV3-15*07	100.0	H4	8	H4-8-1	4	RDDSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L1	17	L1-17-*	-1	KSSQSVlyssnnKNYLA	BBABBABBAABABBBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	85.7	L3	10	L3-10-cis78-*	-1	QQYYRTpPLT	BBAABABbBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	100.0	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022