PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IJV

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
A	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	6	YGDTSRAS	BLEABBBB
A	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBEBAABBB
A	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	9	RSGNTA	BBEABB
B	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	14	TASGFSLSDKAVG	BBBLBBAAABBBB
B	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	77.8	H2	9	H2-9-1	8	NIDTGGITG	BBBAALBBB
B	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H3	46	H3-46-*	-1	TTVHQKTlevrscpdgsrligndcrnedgddvnyittfdYEWYVDA
B	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	9	KDNSKNQV	BBAAALBB
C	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
C	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	8	YGDTSRAS	BLEABBBB
C	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
C	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	11	RSGNTA	BBEABB
D	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H1	13	H1-13-*	-1	TASGFSLSDKAVG	BBBLBBABABBBB
D	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	77.8	H2	9	H2-9-1	12	NIDTGGITG	BBBAALBBB
D	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H3	46	H3-46-*	-1	TTVHQKTlevrscpdgsrligndcrnedgddvnyittfdYEWYVDA
D	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	7	KDNSKNQV	BBAAALBB
E	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
E	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	9	YGDTSRAS	BLEABBBB
E	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
E	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	13	RSGNTA	BBEABB
F	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	25	TASGFSLSDKAVG	BBBLBBABABBBB
F	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	77.8	H2	9	H2-9-1	9	NIDTGGITG	BBBAALBBB
F	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H3	46	H3-46-*	-1	TTVHQKTlevrscpdgsrligndcrnedgddvnyittfdYEWYVDA
F	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	87.5	H4	8	H4-8-*	-1	KDNSKNQV	BBBEBBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	13	TASGFSLSDKAVG	BBBLBBAAABBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	77.8	H2	9	H2-9-1	11	NIDTGGITG	BBBAALBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	100.0	H3	46	H3-46-*	-1	TTVHQKTlevrscpdgsrligndcrnedgddvnyittfdYEWYVDA
H	heavy	Bos.taurus	Bo_IGHV1-7*02	95.9	Bo_IGHV1-7*02	87.5	H4	8	H4-8-1	9	KDNSKNQV	BBAAALBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	7	YGDTSRAS	BLEABBBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	8	RSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022