PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IHL

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	13	AASGFTFRDYEMW	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	14	AINPQGTRTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBAALBAAA
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	12	AASGFTFRDYEMW	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	18	AINPQGTRTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaaEAAA
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	12	AASGFTFRDYEMW	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	19	AINPQGTRTY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaLBAAA
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	12	AASGFTFRDYEMW	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	20	AINPQGTRTY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaLBAAA
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022