PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IBU

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	75.0	L1	12	L1-12-1	11	RASQSVfSTFLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	62.5	L2	8	L2-8-1	6	YAASRRAA	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	7	QQSESSPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	83.3	L4	6	L4-6-2	11	ESGTDF	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	53.8	H1	13	H1-13-1	6	KVSGYNFVKFWIA	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	60.0	H2	10	H2-10-*	-1	VIHPGDSDST	BBBBEBBBBB
G	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARvvgdREGFGYHYGLDV
G	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	7	ADKSINTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	53.8	H1	13	H1-13-1	5	KVSGYNFVKFWIA	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	60.0	H2	10	H2-10-*	-1	VIHPGDSDST	BBBBLBABBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARvvgdREGFGYHYGLDV
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	8	ADKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	75.0	L1	12	L1-12-1	10	RASQSVfSTFLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	62.5	L2	8	L2-8-1	6	YAASRRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	7	QQSESSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	97.1	Hu_IGKV3D-20*02	83.3	L4	6	L4-6-*	-1	ESGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022