PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5IBL

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	18	KGSGYSFSSYWIG	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	18	IINPRDSDTR	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARvvadREGFGYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	8	ADKSISTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-1	15	RASQSVDsSSLA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	17	FAGSSRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-2	19	QQCGNSPWT	BBABEBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L4	6	L4-6-*	-1	TSGTDF	BBAALB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	18	KGSGYSFSSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	13	IINPRDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	18	H3-18-*	-1	ARvvadREGFGYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-1	15	RASQSVDsSSLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	14	FAGSSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	20	QQCGNSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L4	6	L4-6-*	-1	TSGTDF	BBEAAE

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022