PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5I5K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Mo_IGHV1-62-1*01	69.2	H1	13	H1-13-1	12	KASGYIFSNYWIQ	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Mo_IGHV1-62-1*01	80.0	H2	10	H2-10-3	11	EILPGSGSTE	BBBBLALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H3	15	H3-15-*	-1	ARYFFGsSPNWYFDV
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H4	8	H4-8-1	11	RDTSTSTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-89*01	100.0	L1	11	L1-11-1	23	GASENIYGALN	BBABBAEAABB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-89*01	100.0	L2	8	L2-8-1	22	YGATNLAD	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	28.6	L3	9	L3-9-2	20	QNVLNTPLT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-*	-1	GSGTDF	ABEABB
X	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Mo_IGHV1-62-1*01	69.2	H1	13	H1-13-1	12	KASGYIFSNYWIQ	BBBLBBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Mo_IGHV1-62-1*01	80.0	H2	10	H2-10-3	11	EILPGSGSTE	BBBBLALBBB
X	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H3	15	H3-15-*	-1	ARYFFGsSPNWYFDV
X	heavy	Homo.sapiens	Hu_IGHV1-46*02	93.2	Hu_IGHV1-46*02	100.0	H4	8	H4-8-1	11	RDTSTSTV	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-89*01	100.0	L1	11	L1-11-1	24	GASENIYGALN	BBABBAEAABB
Y	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV12-89*01	100.0	L2	8	L2-8-1	22	YGATNLAD	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	28.6	L3	9	L3-9-2	21	QNVLNTPLT	BBAABABBB
Y	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-*	-1	GSGTDF	ABEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022