PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5I17

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEBABB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	11	YGASSRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	18	QQYGSSPLT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBABBBBBBABBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H2	10	H2-10-*	-1	GIIPIFgtan
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H3	12	H3-12-*	-1	ARYDGIYGELDF	BBBBEEALABBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	16	ADESTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEEABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	18	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H3	12	H3-12-*	-1	ARYDGIYGELDF	BBBBEEALABBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	18	ADESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	20	YGASSRAT	BLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	16	QQYGSSPLT	BBBABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022