PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HVH

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSGNAMG	BBBAAAABLBBBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	88.9	H2	9	H2-9-1	16	AITSGGSTD	BBBAALBBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	0.0	H3	16	H3-16-*	-1	HVDPRpwGYDVTDYDY
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSPNAMG	BBBEBBBBBABBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	ARTNVGST
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H3	14	H3-14-*	-1	NAWGQDGWLGQYDY	BBBEBBAAAEBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	14	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022