PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HVF

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSPNAMG	BBBEBBBBBABBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	ARTNVGST
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H3	14	H3-14-*	-1	NAWGQDGWLGQYDY	BBBEBBAAAEBBBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022