PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HJ3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	14	AASGFTLINYRMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	10	SISSSSSYIH	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	50.0	H3	18	H3-18-*	-1	VREGpratGYSMADVFDI
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	87.5	H4	8	H4-8-1	8	RDNAENSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	8	KSSQSVlyssnnKSYLA	BBABBABBAAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	5	QQYYSAPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	14	AASGFTLINYRMN	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	10	SISSSSSYIH	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	50.0	H3	18	H3-18-*	-1	VREGpratGYSMADVFDI
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	87.5	H4	8	H4-8-1	8	RDNAENSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	7	KSSQSVlyssnnKSYLA	BBABBABBAAALBBBBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	5	QQYYSAPLT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	14	AASGFTLINYRMN	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	10	SISSSSSYIH	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	50.0	H3	18	H3-18-*	-1	VREGpratGYSMADVFDI
I	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	87.5	H4	8	H4-8-1	8	RDNAENSL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	8	KSSQSVlyssnnKSYLA	BBABBABBAAALBBBBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	5	QQYYSAPLT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	14	AASGFTLINYRMN	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	10	SISSSSSYIH	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	50.0	H3	18	H3-18-*	-1	VREGpratGYSMADVFDI
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	87.5	H4	8	H4-8-1	8	RDNAENSL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	7	KSSQSVlyssnnKSYLA	BBABBABBAAALBBBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	85.7	L3	9	L3-9-cis7-1	5	QQYYSAPLT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.5	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

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