PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HGG

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
S	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-1	16	AASGFTLDSYAIG	BBBLBBAAABBBB
S	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	90.0	H2	10	H2-10-2	10	CISASGGSTN	BBBAALABBB
S	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	20	H3-20-*	-1	AADHpglctsESGRRRYLEV
S	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
T	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-1	16	AASGFTLDSYAIG	BBBLBBAAABBBB
T	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	90.0	H2	10	H2-10-2	10	CISASGGSTN	BBBAALABBB
T	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	20	H3-20-*	-1	AADHpglctsESGRRRYLEV
T	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022