PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HCG

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV2-6-7*01	69.2	H1	13	H1-13-1	15	TVSGFSLTDSSIN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-1	9	MIWGDGRID	BBBAALBBB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV2-6-7*01	100.0	H3	12	H3-12-*	-1	ARDGYFPYAMDF	BBBBBBaLBBAB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV2-6-7*01	87.5	H4	8	H4-8-1	10	KDSSKSQV	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV1S82*01	84.6	H1	13	H1-13-1	11	KASGYSFTSYWIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV1S82*01	80.0	H2	10	H2-10-1	17	MIDPSDGETR	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV1S82*01	0.0	H3	16	H3-16-*	-1	TRLKEYGNydSFYFDV
H	heavy	Homo.sapiens	Mo_IGHV2-6-7*01	86.3	Mo_IGHV1S82*01	75.0	H4	8	H4-8-1	11	VDESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV3-10*01	86.7	L1	15	L1-15-1	6	RASESVdsygQSYMH	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV3-10*01	71.4	L3	9	L3-9-2	11	QQNAEDSRT	BBAABABBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	5	GSRTDF	EBEABB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV15-103*01	90.9	L1	11	L1-11-1	17	HASQNIDVWLS	BBABBAEABBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV15-103*01	100.0	L2	8	L2-8-1	8	YKASNLHT	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV15-103*01	71.4	L3	9	L3-9-cis7-1	12	QQAHSYPFT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV3-10*01	94.2	Mo_IGKV15-103*01	100.0	L4	6	L4-6-1	6	GSGTGF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022