PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5GZR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H1	13	H1-13-*	-1	KASGYTFTGYYMH
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H2	10	H2-10-*	-1	RINPNSGGTN
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H3	14	H3-14-*	-1	ARTGIAAAGFVFDY
H	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H4	8	H4-8-*	-1	RDTSISTA
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVISNLA
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	85.7	L3	8	L3-8-*	-1	QQYNNWWT
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF
M	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H1	13	H1-13-*	-1	KASGYTFTGYYMH
M	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H2	10	H2-10-*	-1	RINPNSGGTN
M	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H3	14	H3-14-*	-1	ARTGIAAAGFVFDY
M	heavy	Homo.sapiens	Hu_IGHV1-2*06	98.6	Hu_IGHV1-2*06	100.0	H4	8	H4-8-*	-1	RDTSISTA
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVISNLA
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	85.7	L3	8	L3-8-*	-1	QQYNNWWT
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	98.6	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022