PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5GZN

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMH	BBAABBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H2	10	H2-10-2	12	VISYDGSNKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H3	20	H3-20-*	-1	ARDHLGWSsiwsapESFLDY
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	87.5	H4	8	H4-8-1	9	RDNSKSTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	87.5	L2	8	L2-8-1	13	YDSNKRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	88.9	L3	11	L3-11-1	8	GTWDSSLSVWV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	20	AASGFTFSSYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H2	10	H2-10-2	11	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H3	20	H3-20-*	-1	ARDHLGWSsiwsapESFLDY
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	87.5	H4	8	H4-8-1	10	RDNSKSTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	13	SGSSSNIGNNYVS	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	87.5	L2	8	L2-8-1	11	YDSNKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	88.9	L3	11	L3-11-1	8	GTWDSSLSVWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	100.0	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	7	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022