PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5GGU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H2	10	H2-10-2	8	VIWYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	18	H3-18-*	-1	ARDPRgatlYYYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	8	RASQSINSYLD	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	9	YAASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	8	QQYYSTPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H2	10	H2-10-2	17	VIWYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	18	H3-18-*	-1	ARDPRgatlYYYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	6	RASQSINSYLD	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	5	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	9	QQYYSTPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022