PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5GGT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	76.9	H1	13	H1-13-*	-1	KTSGDTFSTYAIS	BBABBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	80.0	H2	10	H2-10-1	22	GIIPIFGKAH	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H3	16	H3-16-*	-1	ARKFHFVSgsPFGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	98.6	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	14	ADESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	15	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	11	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L3	8	L3-8-3	12	QQRSNWPT	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022