PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5FV2

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	14	AASGFTFKAYPMM	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	60.0	H2	10	H2-10-2	7	EISPSGSYTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKDPRKLDY	BABAABAAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	14	AASGFTFKAYPMM	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	60.0	H2	10	H2-10-2	11	EISPSGSYTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKDPRKLDY	BABBLBAAB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	15	AASGFTFKAYPMM	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	60.0	H2	10	H2-10-2	9	EISPSGSYTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKDPRKLDY	BABAABBLB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022