PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5FGC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	88.1	Hu_IGLV3-1*01	81.8	L1	11	L1-11-3	11	SGDKLGDKYVS	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	88.1	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	11	YQDNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	88.1	Hu_IGLV3-1*01	87.5	L3	10	L3-10-3	17	QAWDSSTDVV	BBBBAAAEBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	88.1	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	69.2	H1	13	H1-13-1	10	AASGFNFYTYAMT	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	50.0	H2	10	H2-10-1	20	ASSSTDGTTY	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	50.0	H3	20	H3-20-*	-1	ARavvftdSSAYYYSKYFDY
E	heavy	Homo.sapiens	Hu_IGHV3-23*04	93.2	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	9	RDNSKNIL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022