PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5FEH

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	12	RATQRVgSDYLA	BBABBBBAAABB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	10	YGTSRRAA	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	42.9	L3	8	L3-8-*	-1	RQYETSFS	BBBAABAB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	61.5	H1	13	H1-13-*	-1	VGSeftfsdaWMT
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	H2	12	H2-12-*	-1	Hmrptpeggakd
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	50.0	H3	25	H3-25-*	-1	MTgvekgdfwsddysqhyntyLIDV
B	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	87.5	H4	8	H4-8-1	13	RDDSKRTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	13	RATQRVgSDYLA	BBABBBBAAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	12	YGTSRRAA	BLEABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	42.9	L3	8	L3-8-*	-1	RQYETSFS	BBBAABAB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	61.5	H1	13	H1-13-*	-1	VGSEFTFSDAWMT	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	H2	12	H2-12-*	-1	HMRptpeggakD
D	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	50.0	H3	25	H3-25-*	-1	MTgvekgdfwsddysqhyntyliDV
D	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	87.5	H4	8	H4-8-1	15	RDDSKRTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	12	RATQRVgSDYLA	BBABBBBAAABB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	12	YGTSRRAA	BLEABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	42.9	L3	8	L3-8-*	-1	RQYETSFS	BBBAABAB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	91.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	61.5	H1	13	H1-13-1	17	VGSEFTFSDAWMT	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	H2	12	H2-12-*	-1	HMRPtpEGGAKD	BBBBAAAELBBB
F	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	50.0	H3	25	H3-25-*	-1	MTGvekgdfwsddySQHYNTYLIDV
F	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	87.5	H4	8	H4-8-1	10	RDDSKRTL	BBAAALBB

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