PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5FCU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	87.7	Ma_IGHV4-2*01	76.9	H1	13	H1-13-*	-1	AVPGGSIRRNYWS	BBBAAAAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	87.7	Ma_IGHV4-2*01	60.0	H2	10	H2-10-*	-1	HSYGSGGSTN	BBBAABlBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	87.7	Ma_IGHV4-2*01	100.0	H3	16	H3-16-*	-1	ARTVWYytSGTHYFDH
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	87.7	Ma_IGHV4-2*01	75.0	H4	8	H4-8-1	11	VDTSKNLF	BBAAALBB
L	lambda	Macaca.mulatta	Ma_IGLV1S6*01	97.1	Ma_IGLV1S6*01	100.0	L1	13	L1-13-1	7	SGSSSNIGRSYVS	BBBAAAAAABBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S6*01	97.1	Ma_IGLV1S6*01	87.5	L2	8	L2-8-1	9	YDTNKRPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S6*01	97.1	Ma_IGLV1S6*01	66.7	L3	11	L3-11-1	11	GAWDGSLNVHI	BBBBAAALBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S6*01	97.1	Ma_IGLV1S6*01	83.3	L4	6	L4-6-2	9	KSGSSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022