PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5F9W

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	76.9	H1	13	H1-13-1	9	QASGYTFTNYYVH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	50.0	H2	10	H2-10-*	-1	WIDPSWGRTN	BBBAAAbBBB
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	15	H3-15-*	-1	ARNVATEgSLLHYDY
B	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	6	RDTSTSTV	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	6	RASQSVRSNLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	8	YGTSTRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	71.4	L3	8	L3-8-1	8	LQYNNWWT	BBAABEBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	17	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	76.9	H1	13	H1-13-1	9	QASGYTFTNYYVH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	50.0	H2	10	H2-10-1	11	WIDPSWGRTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	15	H3-15-*	-1	ARNVATEgSLLHYDY
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	8	RDTSTSTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	5	RASQSVRSNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	8	YGTSTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	71.4	L3	8	L3-8-1	8	LQYNNWWT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	89.9	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	18	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022