PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5F7N

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	84.6	H1	13	H1-13-*	-1	AASGSIFSGNVMG	BBBAAAABLBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	12	AITPQGVPN	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	50.0	H3	8	H3-8-*	-1	NRLPNYRS	BBBbBBAB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	75.0	H4	8	H4-8-1	6	RDNAKNML	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	84.6	H1	13	H1-13-*	-1	AASGSIFSGNVMG	BBBAAAABLBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	13	AITPQGVPN	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	50.0	H3	8	H3-8-*	-1	NRLPNYRS	BBBbBBAB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	Al_IGHV3S53*01_VHH	75.0	H4	8	H4-8-1	6	RDNAKNML	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022