PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5F72

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV14-2*01	46.2	H1	13	H1-13-1	17	AASGFAISASSIH	BBBLBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV14-2*01	70.0	H2	10	H2-10-1	10	SIDPETGETL	BBBAAALBBB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	10	ARAYAGDGVYYADV	BBBBBBLLBBBBAB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	72.7	L1	11	L1-11-1	8	RASQSVSSAVA	BBABBAEABBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	5	YSASSLYS	BLLABBBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSFPST	BBAABBbBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	10	RSGTDF	BBEABB
T	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV14-2*01	46.2	H1	13	H1-13-1	15	AASGFAISASSIH	BBBLBBAAABBBB
T	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV14-2*01	70.0	H2	10	H2-10-1	7	SIDPETGETL	BBBAAALBBB
T	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	10	ARAYAGDGVYYADV	BBBBBBLLBBBBAB
T	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	72.7	L1	11	L1-11-1	6	RASQSVSSAVA	BBABBAEABBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	6	YSASSLYS	BLLABBBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	6	QQSYSFPST	BBAABBbBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	9	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022