PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5EWI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	75.3	Hu_IGHV3-13*01	46.2	H1	13	H1-13-1	20	EASGESVGDNDMH	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	75.3	Hu_IGHV3-13*01	66.7	H2	9	H2-9-1	7	SIGSSGDTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	75.3	Hu_IGHV3-13*01	50.0	H3	18	H3-18-*	-1	VRGPEsgwfYHYYWGLGV
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	75.3	Hu_IGHV3-13*01	37.5	H4	8	H4-8-1	9	RDKGRNSV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	89.9	Hu_IGKV2-28*01	81.2	L1	16	L1-16-1	8	RSSQSLllgngRNYLD	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	89.9	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	8	YLGSNRAS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	89.9	Hu_IGKV2-28*01	71.4	L3	10	L3-10-*	-1	MEARQTPrLT	BBAAABaBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	89.9	Hu_IGKV2-28*01	83.3	L4	6	L4-6-1	7	GSGTYF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022