PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5ESV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	61.5	H1	13	H1-13-1	13	AASGFIFENYGLT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	70.0	H2	10	H2-10-2	14	GMNWNGGDTR	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	100.0	H3	26	H3-26-*	-1	ARGTDYTiddqgifykgsgTFWYFDL
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	50.0	H4	8	H4-8-1	9	RDNSNNIA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L1	12	L1-12-1	16	RASQSVHpKYFA	BBABBBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	50.0	L2	8	L2-8-1	12	YSGSTRAA	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	12	QQYGGSPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L4	6	L4-6-1	7	GSGIHF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	61.5	H1	13	H1-13-1	15	AASGFIFENYGLT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	70.0	H2	10	H2-10-2	20	GMNWNGGDTR	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	100.0	H3	26	H3-26-*	-1	ARGTDYTiddqgifykgsgTFWYFDL
C	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	50.0	H4	8	H4-8-1	13	RDNSNNIA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L1	12	L1-12-1	14	RASQSVHpKYFA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	50.0	L2	8	L2-8-1	14	YSGSTRAA	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	15	QQYGGSPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L4	6	L4-6-1	7	GSGIHF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	61.5	H1	13	H1-13-1	12	AASGFIFENYGLT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	70.0	H2	10	H2-10-2	14	GMNWNGGDTR	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	100.0	H3	26	H3-26-*	-1	ARGTDYTiddqgifykgsgTFWYFDL
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	82.2	Hu_IGHV3-20*04	50.0	H4	8	H4-8-1	13	RDNSNNIA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L1	12	L1-12-1	15	RASQSVHpKYFA	BBABBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	50.0	L2	8	L2-8-1	9	YSGSTRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	12	QQYGGSPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	88.4	Hu_IGKV3D-20*02	66.7	L4	6	L4-6-1	8	GSGIHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022