PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5EOQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV8-8*02	91.5	Mo_IGHV8-8*02	86.7	H1	15	H1-15-1	6	SFSGFSLSTSGMgvG	BBBLBBAABBLBBBB
H	heavy	Mus.musculus	Mo_IGHV8-8*02	91.5	Mo_IGHV8-8*02	100.0	H2	9	H2-9-1	12	HIWWDDDKY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-8*02	91.5	Mo_IGHV8-8*02	0.0	H3	11	H3-11-*	-1	AHDRGYYAMDY	BBBALALBBAB
H	heavy	Mus.musculus	Mo_IGHV8-8*02	91.5	Mo_IGHV8-8*02	87.5	H4	8	H4-8-1	5	KDTSRNQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	7	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	10	SQSTHVPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022