PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5EN2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-87*01	86.3	Mo_IGHV1-87*01	92.3	H1	13	H1-13-1	11	KASGYTFTNYWMQ	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-87*01	86.3	Mo_IGHV1-87*01	90.0	H2	10	H2-10-1	10	AVYPGDGDTR	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-87*01	86.3	Mo_IGHV1-87*01	50.0	H3	17	H3-17-*	-1	ARRRVYYgsnYIYALDY
A	heavy	Mus.musculus	Mo_IGHV1-87*01	86.3	Mo_IGHV1-87*01	100.0	H4	8	H4-8-1	6	ADKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-13*01	95.7	Mo_IGKV6-13*01	90.9	L1	11	L1-11-1	4	KASQNVGSAVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-13*01	95.7	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-13*01	95.7	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	7	QQYSSYPLA	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-13*01	95.7	Mo_IGKV6-13*01	83.3	L4	6	L4-6-2	11	ESGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022