PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5E1H

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.8	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-*	-1	AASGTTFSKNAMA	BBEbBBAAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.8	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-2	10	GINWNAVSTN	BBBAALABBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.8	Al_IGHV3-3*01_VHH	50.0	H3	22	H3-22-*	-1	AGSSIYSDisgaatvwATSYNY
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.8	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022