PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DUR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	93.3	H1	15	H1-15-*	-1	TVSGDSVSsgSYYWS	BBBLEBABbAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	44.4	H2	9	H2-9-1	14	NMHGSGHTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	100.0	H3	13	H3-13-*	-1	ARALLTTVTTFEY	BBBBABABBBBAB
B	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	87.5	H4	8	H4-8-1	24	PDTSKNHF	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	85.7	L1	14	L1-14-3	10	TGGSSNIGAgYSVH	BBBAAAAAALBBBB
D	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	62.5	L2	8	L2-8-*	-1	YGSNSRPS	BEBLBBBB
D	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	100.0	L3	12	L3-12-*	-1	QSYDSSLSgSQV
D	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	93.3	H1	15	H1-15-*	-1	TVSGDSVSsgSYYWS	BBBELBABELABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	44.4	H2	9	H2-9-1	14	NMHGSGHTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	100.0	H3	13	H3-13-*	-1	ARALLTTVTTFEY	BBBBABABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV4-61*03	91.8	Hu_IGHV4-61*03	87.5	H4	8	H4-8-1	25	PDTSKNHF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	85.7	L1	14	L1-14-3	10	TGGSSNIGAgYSVH	BBBAABAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	62.5	L2	8	L2-8-*	-1	YGSNSRPS	BEBLBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	100.0	L3	12	L3-12-*	-1	QSYDSSLSgSQV
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	94.1	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022