PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DUP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	13	TNSGFTFSNYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	CDRLenMismatch	-1.0	H2	11	H2-11-*	-1	AISgnggsgTY
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	0.0	H3	20	H3-20-*	-1	VRDDSYDggghygLHNWFDS
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	15	RDNSKNTM	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L1	14	L1-14-*	-1	TGSSSNIGAgYDVH	BEBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	19	YGNSNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	66.7	L3	9	L3-9-*	-1	QSYDSSVVV	BBBBLEEBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	21	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022