PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DRZ

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	64.7	L1	17	L1-17-1	13	RSSRNIlhslnnKNYLA	BBABBABBAAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	62.5	L2	8	L2-8-1	6	IWASMRVS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	57.1	L3	9	L3-9-2	14	QHYYTTHRT	BBAABABBB
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	92.3	H1	13	H1-13-1	5	AASGFTFTDYYMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	40.0	H2	10	H2-10-*	-1	YITKDGSEKK	BBBABAABBB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	100.0	H3	18	H3-18-*	-1	ARDDGYYdrsgYYGVFDL
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	62.5	H4	8	H4-8-1	13	RDNANNLV	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	92.3	H1	13	H1-13-1	9	AASGFTFTDYYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	40.0	H2	10	H2-10-*	-1	YITKDGSEKK	BBBALBBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	100.0	H3	18	H3-18-*	-1	ARDDGYYdrsgYYGVFDL
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	71.2	Hu_IGHV3-11*01	62.5	H4	8	H4-8-*	-1	RDNANNLV	BBBEALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	64.7	L1	17	L1-17-*	-1	RSSRNIlhslnnKNYLA	BBABBABBABLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	62.5	L2	8	L2-8-1	10	IWASMRVS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	57.1	L3	9	L3-9-2	10	QHYYTTHRT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	82.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022