PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DMJ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	9	AASGFTFRDYEMW	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	9	AINPQGTRTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaLBAAA
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	9	AASGFTFRDYEMW	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	10	AINPQGTRTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaLBAAA
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	8	AASGFTFRDYEMW	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	9	AINPQGTRTY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H3	9	H3-9-*	-1	AKLPFTFDD	BBBaLBAAA
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	97.3	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022